STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A162VB29GATA-type zinc finger transcription factor. (58 aa)    
Predicted Functional Partners:
A0A162TA71
Uncharacterized protein.
    
  0.660
A0A163DWQ6
Methyltransf_25 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
  0.621
A0A167MN91
C2H2-type zinc finger transcription factor.
    
  0.621
A0A162Q570
Transcription factor TFIID, C-terminal, TATA-box binding transcription factor.
    
 0.494
A0A167MAP9
Transcription factor TFIID, C-terminal, TATA-box binding transcription factor.
    
 0.494
A0A163D5X6
Uncharacterized protein.
    
 
 0.460
A0A162YCU2
Transcription factor CBF.
    
 
 0.457
A0A162PP00
Importin subunit alpha; Belongs to the importin alpha family.
    
   0.450
A0A162PXL8
Importin subunit alpha; Belongs to the importin alpha family.
    
   0.450
A0A162U022
Importin subunit alpha; Belongs to the importin alpha family.
    
   0.450
Your Current Organism:
Phycomyces blakesleeanus
NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)
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