A0A162W9R5 protein (Phycomyces blakesleeanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A162W9R5

Uncharacterized protein. (291 aa)

Predicted Functional Partners:

PbPdhE1b

0.674

A0A167JUD1

0.669

A0A167K2Z2

0.664

A0A162TUE9

0.620

A0A167JX56

0.620

PbPdhE2

0.617

NDE4

0.613

A0A163D4Q8

0.613

NDE2

0.613

A0A167MLG3

0.606

Your Current Organism:

Phycomyces blakesleeanus

NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A162TUE9	A0A162W9R5	A0A162TUE9	A0A162W9R5	Uncharacterized protein.	Uncharacterized protein.	0.620
A0A162TUE9	A0A163D4Q8	A0A162TUE9	A0A163D4Q8	Uncharacterized protein.	Glutaredoxin domain-containing protein.	0.677
A0A162TUE9	NDE2	A0A162TUE9	A0A167QHY2	Uncharacterized protein.	Dihydrolipoyl dehydrogenase.	0.677
A0A162TUE9	NDE4	A0A162TUE9	A0A162PPD1	Uncharacterized protein.	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	0.677
A0A162W9R5	A0A162TUE9	A0A162W9R5	A0A162TUE9	Uncharacterized protein.	Uncharacterized protein.	0.620
A0A162W9R5	A0A163D4Q8	A0A162W9R5	A0A163D4Q8	Uncharacterized protein.	Glutaredoxin domain-containing protein.	0.613
A0A162W9R5	A0A167JUD1	A0A162W9R5	A0A167JUD1	Uncharacterized protein.	Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.	0.669
A0A162W9R5	A0A167JX56	A0A162W9R5	A0A167JX56	Uncharacterized protein.	Uncharacterized protein.	0.620
A0A162W9R5	A0A167K2Z2	A0A162W9R5	A0A167K2Z2	Uncharacterized protein.	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.664
A0A162W9R5	A0A167MLG3	A0A162W9R5	A0A167MLG3	Uncharacterized protein.	Transket_pyr domain-containing protein.	0.606
A0A162W9R5	NDE2	A0A162W9R5	A0A167QHY2	Uncharacterized protein.	Dihydrolipoyl dehydrogenase.	0.613
A0A162W9R5	NDE4	A0A162W9R5	A0A162PPD1	Uncharacterized protein.	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	0.613
A0A162W9R5	PbPdhE1b	A0A162W9R5	A0A162TQK5	Uncharacterized protein.	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	0.674
A0A162W9R5	PbPdhE2	A0A162W9R5	A0A162XIR0	Uncharacterized protein.	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	0.617
A0A163D4Q8	A0A162TUE9	A0A163D4Q8	A0A162TUE9	Glutaredoxin domain-containing protein.	Uncharacterized protein.	0.677
A0A163D4Q8	A0A162W9R5	A0A163D4Q8	A0A162W9R5	Glutaredoxin domain-containing protein.	Uncharacterized protein.	0.613
A0A163D4Q8	A0A167JUD1	A0A163D4Q8	A0A167JUD1	Glutaredoxin domain-containing protein.	Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.	0.813
A0A163D4Q8	A0A167JX56	A0A163D4Q8	A0A167JX56	Glutaredoxin domain-containing protein.	Uncharacterized protein.	0.677
A0A163D4Q8	A0A167K2Z2	A0A163D4Q8	A0A167K2Z2	Glutaredoxin domain-containing protein.	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.821
A0A163D4Q8	A0A167MLG3	A0A163D4Q8	A0A167MLG3	Glutaredoxin domain-containing protein.	Transket_pyr domain-containing protein.	0.970