A0A162WN41 protein (Phycomyces blakesleeanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A162WN41

Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (261 aa)

Predicted Functional Partners:

A0A167L4C4

0.734

A0A167M859

0.734

A0A162YHP6

0.719

A0A162PYG2

0.701

PkaR4

0.656

A0A162TW34

0.639

A0A162YFQ0

0.634

A0A167NAD1

0.631

A0A163DKY2

0.621

Pp2B2

0.621

Your Current Organism:

Phycomyces blakesleeanus

NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A162PYG2	A0A162TW34	A0A162PYG2	A0A162TW34	Protein kinase domain-containing protein.	Rap-GAP domain-containing protein.	0.445
A0A162PYG2	A0A162WN41	A0A162PYG2	A0A162WN41	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.701
A0A162PYG2	A0A162YFQ0	A0A162PYG2	A0A162YFQ0	Protein kinase domain-containing protein.	Uncharacterized protein.	0.998
A0A162PYG2	A0A162YHP6	A0A162PYG2	A0A162YHP6	Protein kinase domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.925
A0A162PYG2	A0A167L4C4	A0A162PYG2	A0A167L4C4	Protein kinase domain-containing protein.	Carbohydrate-binding module family 48 protein.	0.763
A0A162PYG2	A0A167M859	A0A162PYG2	A0A167M859	Protein kinase domain-containing protein.	Carbohydrate-binding module family 48 protein.	0.814
A0A162PYG2	A0A167NAD1	A0A162PYG2	A0A167NAD1	Protein kinase domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.841
A0A162PYG2	PkaR4	A0A162PYG2	A0A167JYB0	Protein kinase domain-containing protein.	cAMP-dependent protein kinase regulatory subunit.	0.609
A0A162TW34	A0A162PYG2	A0A162TW34	A0A162PYG2	Rap-GAP domain-containing protein.	Protein kinase domain-containing protein.	0.445
A0A162TW34	A0A162WN41	A0A162TW34	A0A162WN41	Rap-GAP domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.639
A0A162TW34	A0A162YFQ0	A0A162TW34	A0A162YFQ0	Rap-GAP domain-containing protein.	Uncharacterized protein.	0.457
A0A162TW34	A0A162YHP6	A0A162TW34	A0A162YHP6	Rap-GAP domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.828
A0A162TW34	A0A167L4C4	A0A162TW34	A0A167L4C4	Rap-GAP domain-containing protein.	Carbohydrate-binding module family 48 protein.	0.794
A0A162TW34	A0A167M859	A0A162TW34	A0A167M859	Rap-GAP domain-containing protein.	Carbohydrate-binding module family 48 protein.	0.838
A0A162TW34	A0A167NAD1	A0A162TW34	A0A167NAD1	Rap-GAP domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.811
A0A162WN41	A0A162PYG2	A0A162WN41	A0A162PYG2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein.	0.701
A0A162WN41	A0A162TW34	A0A162WN41	A0A162TW34	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Rap-GAP domain-containing protein.	0.639
A0A162WN41	A0A162YFQ0	A0A162WN41	A0A162YFQ0	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.634
A0A162WN41	A0A162YHP6	A0A162WN41	A0A162YHP6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	WD_REPEATS_REGION domain-containing protein.	0.719
A0A162WN41	A0A163DKY2	A0A162WN41	A0A163DKY2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.621