STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A162YL98Serine/Threonine kinase CK1. (307 aa)    
Predicted Functional Partners:
A0A162N504
Uncharacterized protein.
    
 0.897
A0A162V5I0
Photolyase/cryptochrome alpha/beta domain-containing protein.
    
 0.893
A0A167MQ63
RIO domain-containing protein.
    
 0.891
A0A163D4D9
DUF663 domain-containing protein.
    
 0.839
A0A167R716
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
    
 0.814
A0A162PHJ4
KH type-2 domain-containing protein.
    
 0.776
A0A162U6I0
KH type-2 domain-containing protein.
    
 0.776
A0A167KVT7
KH type-2 domain-containing protein.
    
 0.776
A0A163DRM7
Serine/Threonine kinase CK1; Belongs to the protein kinase superfamily.
  
 
0.770
A0A167KM88
KH domain-containing protein.
    
 0.756
Your Current Organism:
Phycomyces blakesleeanus
NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)
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