STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A163B148Uncharacterized protein. (583 aa)    
Predicted Functional Partners:
A0A162WNK8
Sas10 domain-containing protein.
   
   0.955
A0A162N504
Uncharacterized protein.
   
 
 0.949
A0A163CS98
Uncharacterized protein.
   
 
 0.930
A0A167K9P5
WD_REPEATS_REGION domain-containing protein.
   
 
 0.927
A0A162TTC6
RNA helicase.
   
 
 0.904
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
   0.894
A0A167MXT5
Uncharacterized protein.
   
 
 0.894
A0A167R208
Uncharacterized protein.
 
      0.893
A0A162TB59
Nop domain-containing protein.
   
   0.891
A0A163AJ29
Nop domain-containing protein.
   
   0.891
Your Current Organism:
Phycomyces blakesleeanus
NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.