A0A163D7W7 protein (Phycomyces blakesleeanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A163D7W7

Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (307 aa)

Predicted Functional Partners:

A0A162TL05

0.855

A0A162NKB6

0.780

A0A167NTK3

0.780

A0A167MS09

0.736

A0A167N6P2

0.713

A0A167N971

0.708

A0A162PK83

0.671

A0A167L3T7

0.665

A0A162TFX1

0.654

A0A167MCJ8

0.654

Your Current Organism:

Phycomyces blakesleeanus

NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A162NKB6	A0A162TL05	Uncharacterized protein.	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.	0.932
A0A162NKB6	A0A163D7W7	Uncharacterized protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.780
A0A162NKB6	A0A167MS09	Uncharacterized protein.	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.	0.864
A0A162NKB6	A0A167N6P2	Uncharacterized protein.	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.	0.861
A0A162NKB6	A0A167NTK3	Uncharacterized protein.	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.	0.864
A0A162PK83	A0A163D7W7	Uncharacterized protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.671
A0A162TFX1	A0A163D7W7	Glycosyltransferase family 34 protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.654
A0A162TFX1	A0A167N971	Glycosyltransferase family 34 protein.	Uncharacterized protein; Belongs to the phosphohexose mutase family.	0.805
A0A162TL05	A0A162NKB6	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.	Uncharacterized protein.	0.932
A0A162TL05	A0A163D7W7	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.855
A0A162TL05	A0A167MS09	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.	0.756
A0A162TL05	A0A167N6P2	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.	0.875
A0A162TL05	A0A167NTK3	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.	0.748
A0A163D7W7	A0A162NKB6	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein.	0.780
A0A163D7W7	A0A162PK83	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein.	0.671
A0A163D7W7	A0A162TFX1	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Glycosyltransferase family 34 protein.	0.654
A0A163D7W7	A0A162TL05	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.	0.855
A0A163D7W7	A0A167L3T7	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	ULP_PROTEASE domain-containing protein.	0.665
A0A163D7W7	A0A167MCJ8	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Glycosyltransferase family 34 protein.	0.654
A0A163D7W7	A0A167MS09	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.	0.736