STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A163DGM7ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER). Belongs to the EMC3 family. (274 aa)    
Predicted Functional Partners:
A0A163ER07
Uncharacterized protein.
   
 
 0.996
A0A162ZFF7
TPR_REGION domain-containing protein.
   
 
 0.995
A0A162TC01
EMC1_C domain-containing protein.
    
 
 0.993
A0A162PWU7
Uncharacterized protein.
   
 
 0.990
A0A167JH14
DUF2012 domain-containing protein.
   
 
 0.967
A0A162TS87
Uncharacterized protein.
   
 
 0.958
A0A162N5U0
MPN domain-containing protein.
    
 
 0.952
A0A163DEF0
Uncharacterized protein.
    
 
 0.948
A0A162TS36
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.934
A0A162N2F7
L-type lectin-like domain-containing protein.
   
 
 0.746
Your Current Organism:
Phycomyces blakesleeanus
NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)
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