STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A167J9D7Uncharacterized protein. (447 aa)    
Predicted Functional Partners:
A0A162UBS3
Uncharacterized protein.
   
 
 0.929
A0A162XGA6
Uncharacterized protein.
    
 
 0.894
A0A167PZG6
Uncharacterized protein.
    
   0.894
A0A167RGN6
Uncharacterized protein.
    
 
 0.715
A0A162UW55
RRM domain-containing protein.
    
 
 0.671
A0A162PXZ2
CCHC-type zinc finger transcription factor.
   
 
 0.631
A0A162Q749
CCHC-type zinc finger transcription factor.
   
 
 0.631
A0A162TXG7
Homeodomain-like DNA binding domain-containing transcription factor.
   
 
 0.631
A0A167R8F4
DDE_3 domain-containing protein.
   
 
 0.631
A0A167J552
Uncharacterized protein.
    
 
 0.602
Your Current Organism:
Phycomyces blakesleeanus
NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.