STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A167JWE3Uncharacterized protein. (523 aa)    
Predicted Functional Partners:
A0A162YCU2
Transcription factor CBF.
    
 
 0.457
A0A167KS92
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.447
A0A167MHP5
Hist_deacetyl domain-containing protein.
   
 0.447
A0A167Q7Z4
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.447
A0A163DWQ6
Methyltransf_25 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
  0.442
A0A167MN91
C2H2-type zinc finger transcription factor.
    
  0.442
A0A162YDM4
Uncharacterized protein.
    
 0.421
A0A167KUE7
Uncharacterized protein.
    
 0.421
A0A167MPR1
Uncharacterized protein.
    
 0.421
A0A162NBQ7
Transcription factor CBF.
    
 
 0.416
Your Current Organism:
Phycomyces blakesleeanus
NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)
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