STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A167KBK0Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (387 aa)    
Predicted Functional Partners:
A0A163DWC8
Tr-type G domain-containing protein.
   
 
 0.994
A0A167MVK1
Uncharacterized protein.
  
 
 0.944
A0A162Q3C7
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
    
 
 0.922
A0A162TQR7
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
   
   0.917
A0A162ZIR2
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
    
   0.917
A0A163AF11
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
    
   0.916
A0A163AUC2
Uncharacterized protein.
  
   0.916
A0A167KFC3
WD_REPEATS_REGION domain-containing protein.
    
 
 0.915
A0A167MH44
WD_REPEATS_REGION domain-containing protein.
    
 
 0.915
A0A162NKL6
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
    
   0.914
Your Current Organism:
Phycomyces blakesleeanus
NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)
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