STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A167KHD2Alkyl transferase; Belongs to the UPP synthase family. (270 aa)    
Predicted Functional Partners:
A0A162PSU6
Uncharacterized protein.
   
 0.999
A0A167NPH3
Farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.880
A0A162TCT0
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
     
 0.863
A0A167M384
Uncharacterized protein.
     
 0.863
A0A162PL29
Solanesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.856
A0A162TW76
Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family.
   
 0.847
A0A167K253
RRF domain-containing protein.
  
  
 0.847
dmappS
Isopentenyl-diphosphate delta-isomerase.
  
 
 0.841
A0A163DFH0
Uncharacterized protein.
    
 0.837
carC
Geranylgeranyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
  
 
 0.816
Your Current Organism:
Phycomyces blakesleeanus
NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)
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