A0A167KQL0 protein (Phycomyces blakesleeanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A167KQL0

Uncharacterized protein. (262 aa)

Predicted Functional Partners:

A0A162Q672

0.978

A0A167MI67

0.966

A0A162NJ68

0.959

A0A163DUP1

0.959

A0A163EEW0

0.952

A0A167N6Y4

0.923

A0A162NGA9

0.921

A0A162V0T7

0.916

A0A167N8A1

0.916

A0A162UT20

0.898

Your Current Organism:

Phycomyces blakesleeanus

NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A162NGA9	A0A162NJ68	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.997
A0A162NGA9	A0A162Q672	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
A0A162NGA9	A0A162UT20	AAA domain-containing protein; Belongs to the AAA ATPase family.	PCI domain-containing protein.	0.999
A0A162NGA9	A0A162V0T7	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.996
A0A162NGA9	A0A163DUP1	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.997
A0A162NGA9	A0A163EEW0	AAA domain-containing protein; Belongs to the AAA ATPase family.	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.999
A0A162NGA9	A0A167KQL0	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.921
A0A162NGA9	A0A167MI67	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
A0A162NGA9	A0A167N6Y4	AAA domain-containing protein; Belongs to the AAA ATPase family.	PCI domain-containing protein.	0.999
A0A162NGA9	A0A167N8A1	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.996
A0A162NJ68	A0A162NGA9	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.997
A0A162NJ68	A0A162Q672	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.995
A0A162NJ68	A0A162UT20	AAA domain-containing protein; Belongs to the AAA ATPase family.	PCI domain-containing protein.	0.994
A0A162NJ68	A0A162V0T7	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.991
A0A162NJ68	A0A163EEW0	AAA domain-containing protein; Belongs to the AAA ATPase family.	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.994
A0A162NJ68	A0A167KQL0	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.959
A0A162NJ68	A0A167MI67	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.997
A0A162NJ68	A0A167N6Y4	AAA domain-containing protein; Belongs to the AAA ATPase family.	PCI domain-containing protein.	0.997
A0A162NJ68	A0A167N8A1	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.991
A0A162Q672	A0A162NGA9	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999