STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A167P4X9OTU domain-containing protein. (328 aa)    
Predicted Functional Partners:
A0A162NCT3
OTU domain-containing protein.
    
 
 0.556
A0A162UIV0
Homeodomain-like DNA binding domain-containing transcription factor.
   
 
 0.534
A0A163EPL5
Homeodomain-like DNA binding domain-containing transcription factor.
   
 
 0.534
A0A167LQA9
Ubiquitin carboxyl-terminal hydrolase.
   
  
 0.512
A0A162YGV5
HECT domain-containing protein.
      
 0.487
A0A163E9C7
MPN domain-containing protein.
   
  
 0.480
A0A167MA44
MPN domain-containing protein.
   
  
 0.466
A0A162V891
C2H2-type zinc finger transcription factor.
      
 0.465
A0A162X2C4
Ubiquitin carboxyl-terminal hydrolase.
      
 0.465
A0A162NEJ9
USP domain-containing protein; Belongs to the peptidase C19 family.
      
 0.461
Your Current Organism:
Phycomyces blakesleeanus
NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)
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