STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A167P6G0Fe2OG dioxygenase domain-containing protein. (518 aa)    
Predicted Functional Partners:
A0A162V9I0
Uncharacterized protein.
   
 
 0.993
A0A167PRA4
Uncharacterized protein.
   
 
 0.993
A0A162PSN1
Uncharacterized protein.
   
 
 0.890
A0A167L2T0
Uncharacterized protein.
   
   0.877
A0A162V3L9
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
   0.800
A0A163EC73
Uncharacterized protein.
   
   0.597
A0A163AN61
tRNA (guanine(26)-N(2))-dimethyltransferase.
   
 
 0.584
A0A162Q3C7
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
    
 
 0.533
A0A162WE04
Uncharacterized protein.
   
   0.526
A0A167N5J4
Uncharacterized protein.
   
   0.526
Your Current Organism:
Phycomyces blakesleeanus
NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)
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