STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A167QS36CPSF_A domain-containing protein. (1317 aa)    
Predicted Functional Partners:
A0A162TNW4
CID domain-containing protein.
   
 0.999
A0A162QAC5
Splicing factor subunit; Belongs to the SF3B5 family.
   
 0.985
A0A167KR42
SF3b1 domain-containing protein.
   
 0.984
A0A162N8W7
PSP domain-containing protein.
   
 0.983
A0A162WGT1
Uncharacterized protein.
   
 0.983
A0A162ZLU6
Uncharacterized protein.
   
 0.983
A0A163B835
RRM domain-containing protein.
    
 0.982
A0A162N8H3
Matrin-type domain-containing protein.
   
 0.978
A0A167QQJ9
Matrin-type domain-containing protein.
   
 0.976
A0A162ZYA7
LRRcap domain-containing protein.
    
 0.974
Your Current Organism:
Phycomyces blakesleeanus
NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.