STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2G5B2C2Nucleotidyltransferase. (311 aa)    
Predicted Functional Partners:
A0A2G5B2B7
Antiviral helicase.
   
 
 0.884
A0A2G5BKP5
Rcd1-domain-containing protein.
    
   0.857
A0A2G5B1C2
Antiviral helicase.
   
 
 0.684
A0A2G5BIU5
Importin-8.
   
 
 0.627
A0A2G5BGA0
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
    
 
 0.572
A0A2G5BJ85
RNA-binding domain-containing protein.
    
 
 0.540
A0A2G5BJA9
RNA-binding domain-containing protein.
    
 
 0.540
A0A2G5BD55
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...]
    
 
 0.509
A0A2G5BAP0
Ribosomal_L2_C domain-containing protein.
    
   0.483
A0A2G5B9M2
5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.
    
 
 0.449
Your Current Organism:
Coemansia reversa
NCBI taxonomy Id: 763665
Other names: C. reversa NRRL 1564, Coemansia reversa NRRL 1564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.