STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mo00116LEA_2 domain-containing protein. (299 aa)    
Predicted Functional Partners:
Mo02443
TR_THY domain-containing protein.
     
 0.577
Mo03902
Uncharacterized protein.
     
 0.577
Mo04403
Uncharacterized protein.
     
 0.577
Mo04911
Uncharacterized protein.
     
 0.577
Mo05784
Peptidase_S15 domain-containing protein.
     
 0.577
Mo06418
Uncharacterized protein.
     
 0.577
Mo00336
Rhomboid domain-containing protein.
    
 0.536
Mo01461
Rhomboid domain-containing protein.
    
 0.536
Mo02144
Zn(2)-C6 fungal-type domain-containing protein.
     
 0.502
Mo03382
Uncharacterized protein.
     
 0.502
Your Current Organism:
Mixia osmundae
NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.