STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mo01936Hist_deacetyl domain-containing protein. (725 aa)    
Predicted Functional Partners:
Mo01135
Uncharacterized protein.
     
 0.953
Mo05442
WD_REPEATS_REGION domain-containing protein.
   
 0.869
Mo04824
BRCT domain-containing protein.
    
 0.812
Mo03803
ENDO3c domain-containing protein.
    
 0.799
Mo03280
FAS1 domain-containing protein.
    
 0.773
Mo03567
HDAC_interact domain-containing protein.
    
 0.773
Mo05171
HDAC_interact domain-containing protein.
    
 0.773
Mo00343
Histone H2B; Belongs to the histone H2B family.
    
 0.769
Mo03677
Thioredoxin-like_fold domain-containing protein.
    
 0.765
Mo04668
Uncharacterized protein.
    
 0.740
Your Current Organism:
Mixia osmundae
NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.