Mo02535 protein (Mixia osmundae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Mo02535

Uncharacterized protein; Belongs to the glycosyl hydrolase 12 (cellulase H) family. (496 aa)

Predicted Functional Partners:

Mo05107

0.732

Mo02635

0.709

Mo03754

0.667

Mo06360

0.667

Mo05110

0.605

Mo05996

0.564

Mo00650

0.500

Mo05651

0.496

Mo00076

0.447

Mo00420

0.447

Your Current Organism:

Mixia osmundae

NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Mo00076	Mo02535	G7DS75	G7DZ68	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyl hydrolase 12 (cellulase H) family.	0.447
Mo00076	Mo02635	G7DS75	G7DZG7	Uncharacterized protein.	Uncharacterized protein.	0.813
Mo00076	Mo05107	G7DS75	G7E6G1	Uncharacterized protein.	Peptidase C50 domain-containing protein.	0.626
Mo00076	Mo05110	G7DS75	G7E6G4	Uncharacterized protein.	Uncharacterized protein.	0.792
Mo00076	Mo05996	G7DS75	G7E9I2	Uncharacterized protein.	Uncharacterized protein.	0.794
Mo00420	Mo02535	G7DTC7	G7DZ68	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein; Belongs to the glycosyl hydrolase 12 (cellulase H) family.	0.447
Mo00420	Mo02635	G7DTC7	G7DZG7	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.813
Mo00420	Mo05107	G7DTC7	G7E6G1	WD_REPEATS_REGION domain-containing protein.	Peptidase C50 domain-containing protein.	0.626
Mo00420	Mo05110	G7DTC7	G7E6G4	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.792
Mo00420	Mo05996	G7DTC7	G7E9I2	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.835
Mo00650	Mo02535	G7DTU3	G7DZ68	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein; Belongs to the glycosyl hydrolase 12 (cellulase H) family.	0.500
Mo00650	Mo02635	G7DTU3	G7DZG7	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.951
Mo00650	Mo03754	G7DTU3	G7E2L9	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	WD_REPEATS_REGION domain-containing protein.	0.706
Mo00650	Mo05107	G7DTU3	G7E6G1	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Peptidase C50 domain-containing protein.	0.906
Mo00650	Mo05110	G7DTU3	G7E6G4	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.808
Mo00650	Mo05996	G7DTU3	G7E9I2	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.542
Mo00650	Mo06360	G7DTU3	G7E939	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	WD_REPEATS_REGION domain-containing protein.	0.706
Mo02535	Mo00076	G7DZ68	G7DS75	Uncharacterized protein; Belongs to the glycosyl hydrolase 12 (cellulase H) family.	Uncharacterized protein.	0.447
Mo02535	Mo00420	G7DZ68	G7DTC7	Uncharacterized protein; Belongs to the glycosyl hydrolase 12 (cellulase H) family.	WD_REPEATS_REGION domain-containing protein.	0.447
Mo02535	Mo00650	G7DZ68	G7DTU3	Uncharacterized protein; Belongs to the glycosyl hydrolase 12 (cellulase H) family.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.500