STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mo02707Vezatin domain-containing protein. (823 aa)    
Predicted Functional Partners:
Mo00754
UmuC domain-containing protein.
   
 0.998
Mo05761
3'-5' exonuclease domain-containing protein.
  
 0.994
Mo06396
AAA domain-containing protein.
  
 0.988
Mo05927
Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]
   
 0.984
Mo02339
AAA domain-containing protein.
  
 0.979
Mo06137
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
   
 0.976
Mo04442
AAA domain-containing protein.
  
 0.975
Mo03671
DNA polymerase.
  
 0.969
Mo00602
Uncharacterized protein.
   
 0.967
Mo01248
AAA domain-containing protein.
  
 0.966
Your Current Organism:
Mixia osmundae
NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324
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