STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mo03276Uncharacterized protein. (1763 aa)    
Predicted Functional Partners:
Mo00411
Uncharacterized protein.
    
 
 0.990
Mo02177
CBFD_NFYB_HMF domain-containing protein.
    
 
 0.930
Mo03321
CBFD_NFYB_HMF domain-containing protein.
    
 
 0.898
Mo03543
PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...]
 
      0.728
Mo04513
Uncharacterized protein.
 
      0.695
Mo03540
Uncharacterized protein.
  
 
0.635
Mo03536
Uncharacterized protein.
   
  
 0.630
Mo00359
Uncharacterized protein.
    
 
 0.626
Mo01524
Uncharacterized protein; Belongs to the glycosyl hydrolase 26 family.
   
 
 0.603
Mo00347
TFIIB-type domain-containing protein.
    
 
 0.583
Your Current Organism:
Mixia osmundae
NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.