STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mo04517Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (245 aa)    
Predicted Functional Partners:
Mo02559
60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.
  
 
 0.997
Mo06718
Uncharacterized protein.
  
 
 0.997
Mo04849
Ribosomal_L7Ae domain-containing protein.
   
 
 0.995
Mo05610
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
  
 
 0.992
Mo06044
Uncharacterized protein.
  
 
 0.991
Mo01634
KOW domain-containing protein.
  
 
 0.990
Mo01855
Ribosomal_L7Ae domain-containing protein.
   
 
 0.990
Mo02127
TRASH domain-containing protein.
   
 
 0.990
Mo04160
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.990
Mo05957
Ribosomal_L16 domain-containing protein.
   
 
 0.990
Your Current Organism:
Mixia osmundae
NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.