STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mo04859Uncharacterized protein. (278 aa)    
Predicted Functional Partners:
Mo06006
Uncharacterized protein.
   
 
 0.989
Mo04157
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
 0.979
Mo05084
RNA helicase.
   
 
 0.977
Mo01194
U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.
   
 
 0.976
Mo06333
NUC153 domain-containing protein.
   
 
 0.975
Mo05438
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.974
Mo05936
Uncharacterized protein.
   
 
 0.974
Mo04455
Uncharacterized protein.
   
 
 0.967
Mo02752
Uncharacterized protein.
   
 
 0.966
Mo05488
WD_REPEATS_REGION domain-containing protein.
   
 
 0.966
Your Current Organism:
Mixia osmundae
NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324
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