STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mo05425UvrD-like helicase ATP-binding domain-containing protein. (1976 aa)    
Predicted Functional Partners:
Mo06307
CID domain-containing protein.
   
 
 0.959
Mo03004
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.871
Mo04934
Uncharacterized protein.
   
 0.679
Mo06723
Uncharacterized protein.
    
 
 0.663
Mo03080
Sister chromatid cohesion protein.
   
    0.643
Mo04931
CCHC-type domain-containing protein.
   
 
 0.643
Mo01756
Nuclear cap-binding protein subunit 2.
    
 
 0.582
Mo00233
RNase H domain-containing protein.
    
 
 0.573
Mo06671
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
 
 0.571
Mo01217
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.564
Your Current Organism:
Mixia osmundae
NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324
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