STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mo05473tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (576 aa)    
Predicted Functional Partners:
Mo03599
Ribosomal_L23eN domain-containing protein.
   
 0.992
Mo04849
Ribosomal_L7Ae domain-containing protein.
   
 0.992
Mo03860
Uncharacterized protein.
   
 0.991
Mo00212
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.990
Mo02585
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.988
Mo06718
Uncharacterized protein.
   
 0.988
Mo02080
Ribosomal_L18_c domain-containing protein.
   
 0.987
Mo02898
FAD-binding FR-type domain-containing protein.
  
 0.985
Mo04616
Uncharacterized protein.
   
 0.984
Mo01634
KOW domain-containing protein.
   
 0.983
Your Current Organism:
Mixia osmundae
NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.