STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mo05667WD_REPEATS_REGION domain-containing protein. (448 aa)    
Predicted Functional Partners:
Mo05957
Ribosomal_L16 domain-containing protein.
    
 
 0.988
Mo05696
WD_REPEATS_REGION domain-containing protein.
   
  
 0.856
Mo01550
Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.
    
 
 0.784
Mo05573
Fes1 domain-containing protein.
    
 
 0.784
Mo01284
WD_REPEATS_REGION domain-containing protein.
  
    0.763
Mo02418
G_PROTEIN_RECEP_F1_2 domain-containing protein.
    
 0.623
Mo04182
Uncharacterized protein.
    
 0.623
Mo05488
WD_REPEATS_REGION domain-containing protein.
   
  
 0.609
Mo03793
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
  
 0.581
Mo06711
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
  
 0.577
Your Current Organism:
Mixia osmundae
NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324
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