STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHJ56203.1ABC transporter, ATP-binding protein. (247 aa)    
Predicted Functional Partners:
EHJ56124.1
ABC transporter, permease protein.
 
 0.998
EHJ56476.1
ABC transporter, substrate-binding protein, family 3.
 
 0.985
EHJ56939.1
ABC transporter, permease protein.
 0.966
EHJ55624.1
ABC transporter, permease protein.
 0.965
EHJ56863.1
ABC transporter, permease protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
 0.954
EHJ55815.1
Putative glutamine ABC transporter, permease protein GlnP.
 0.942
EHJ56063.1
ABC transporter, permease protein.
 0.937
EHJ56288.1
Putative glutamine ABC transporter, permease protein GlnM.
 0.935
EHJ56847.1
ABC transporter transmembrane region.
 
     
0.891
EHJ57308.1
ABC transporter, substrate-binding protein, family 3.
 
 0.873
Your Current Organism:
Streptococcus urinalis
NCBI taxonomy Id: 764291
Other names: S. urinalis 2285-97, Streptococcus urinalis 2285-97, Streptococcus urinalis CCUG 41590, Streptococcus urinalis CDC 2285-97, Streptococcus urinalis CIP 106463, Streptococcus urinalis DSM 16830, Streptococcus urinalis LMG 19649, Streptococcus urinalis str. 2285-97, Streptococcus urinalis strain 2285-97
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