Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EHJ55643.1 | EHJ57607.1 | STRUR_0947 | STRUR_0946 | S-adenosylmethionine-dependent methyltransferase. | Arylsulfatase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.579 |
| EHJ55643.1 | EHJ57772.1 | STRUR_0947 | STRUR_0950 | S-adenosylmethionine-dependent methyltransferase. | Hypothetical protein; Belongs to the UPF0342 family. | 0.561 |
| EHJ55643.1 | aroC | STRUR_0947 | STRUR_0949 | S-adenosylmethionine-dependent methyltransferase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.612 |
| EHJ55643.1 | aroD | STRUR_0947 | STRUR_0948 | S-adenosylmethionine-dependent methyltransferase. | 3-dehydroquinate dehydratase, type I; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | 0.796 |
| EHJ56480.1 | EHJ57033.1 | STRUR_0304 | STRUR_0780 | Transporter, major facilitator family protein. | Chorismate mutase. | 0.408 |
| EHJ56480.1 | EHJ57177.1 | STRUR_0304 | STRUR_0301 | Transporter, major facilitator family protein. | AP endonuclease, family 2. | 0.722 |
| EHJ56480.1 | aroC | STRUR_0304 | STRUR_0949 | Transporter, major facilitator family protein. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.479 |
| EHJ56480.1 | aroD | STRUR_0304 | STRUR_0948 | Transporter, major facilitator family protein. | 3-dehydroquinate dehydratase, type I; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | 0.713 |
| EHJ56480.1 | aroE | STRUR_0304 | STRUR_0305 | Transporter, major facilitator family protein. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.921 |
| EHJ56480.1 | pabB | STRUR_0304 | STRUR_1952 | Transporter, major facilitator family protein. | Aminodeoxychorismate synthase, component I. | 0.781 |
| EHJ57033.1 | EHJ56480.1 | STRUR_0780 | STRUR_0304 | Chorismate mutase. | Transporter, major facilitator family protein. | 0.408 |
| EHJ57033.1 | EHJ57177.1 | STRUR_0780 | STRUR_0301 | Chorismate mutase. | AP endonuclease, family 2. | 0.591 |
| EHJ57033.1 | aroC | STRUR_0780 | STRUR_0949 | Chorismate mutase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.792 |
| EHJ57033.1 | aroD | STRUR_0780 | STRUR_0948 | Chorismate mutase. | 3-dehydroquinate dehydratase, type I; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | 0.566 |
| EHJ57033.1 | aroE | STRUR_0780 | STRUR_0305 | Chorismate mutase. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.743 |
| EHJ57033.1 | aroK | STRUR_0780 | STRUR_0687 | Chorismate mutase. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.762 |
| EHJ57033.1 | pabB | STRUR_0780 | STRUR_1952 | Chorismate mutase. | Aminodeoxychorismate synthase, component I. | 0.913 |
| EHJ57177.1 | EHJ56480.1 | STRUR_0301 | STRUR_0304 | AP endonuclease, family 2. | Transporter, major facilitator family protein. | 0.722 |
| EHJ57177.1 | EHJ57033.1 | STRUR_0301 | STRUR_0780 | AP endonuclease, family 2. | Chorismate mutase. | 0.591 |
| EHJ57177.1 | aroD | STRUR_0301 | STRUR_0948 | AP endonuclease, family 2. | 3-dehydroquinate dehydratase, type I; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | 0.785 |
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