Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EHJ55857.1 | EHJ56084.1 | STRUR_1031 | STRUR_1033 | Cell surface heme-binding protein Shp; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Putative high-affinity heme uptake system protein IsdE; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.528 |
| EHJ55857.1 | EHJ56108.1 | STRUR_1031 | STRUR_1030 | Cell surface heme-binding protein Shp; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Hypothetical protein. | 0.618 |
| EHJ55857.1 | EHJ56604.1 | STRUR_1031 | STRUR_1029 | Cell surface heme-binding protein Shp; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Hypothetical protein; Identified by glimmer; putative. | 0.455 |
| EHJ55857.1 | EHJ56801.1 | STRUR_1031 | STRUR_1028 | Cell surface heme-binding protein Shp; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Putative membrane protein. | 0.418 |
| EHJ55857.1 | EHJ57036.1 | STRUR_1031 | STRUR_1035 | Cell surface heme-binding protein Shp; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | ABC transporter, ATP-binding protein. | 0.474 |
| EHJ55857.1 | EHJ57038.1 | STRUR_1031 | STRUR_1032 | Cell surface heme-binding protein Shp; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Putative high-affinity heme uptake system protein IsdE; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.823 |
| EHJ55857.1 | EHJ57283.1 | STRUR_1031 | STRUR_1034 | Cell surface heme-binding protein Shp; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Iron chelate uptake ABC transporter, FeCT family, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.496 |
| EHJ56084.1 | EHJ55857.1 | STRUR_1033 | STRUR_1031 | Putative high-affinity heme uptake system protein IsdE; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Cell surface heme-binding protein Shp; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.528 |
| EHJ56084.1 | EHJ57036.1 | STRUR_1033 | STRUR_1035 | Putative high-affinity heme uptake system protein IsdE; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | ABC transporter, ATP-binding protein. | 0.976 |
| EHJ56084.1 | EHJ57038.1 | STRUR_1033 | STRUR_1032 | Putative high-affinity heme uptake system protein IsdE; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Putative high-affinity heme uptake system protein IsdE; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.869 |
| EHJ56084.1 | EHJ57283.1 | STRUR_1033 | STRUR_1034 | Putative high-affinity heme uptake system protein IsdE; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Iron chelate uptake ABC transporter, FeCT family, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.988 |
| EHJ56108.1 | EHJ55857.1 | STRUR_1030 | STRUR_1031 | Hypothetical protein. | Cell surface heme-binding protein Shp; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.618 |
| EHJ56108.1 | EHJ56604.1 | STRUR_1030 | STRUR_1029 | Hypothetical protein. | Hypothetical protein; Identified by glimmer; putative. | 0.558 |
| EHJ56108.1 | EHJ56801.1 | STRUR_1030 | STRUR_1028 | Hypothetical protein. | Putative membrane protein. | 0.510 |
| EHJ56108.1 | EHJ57038.1 | STRUR_1030 | STRUR_1032 | Hypothetical protein. | Putative high-affinity heme uptake system protein IsdE; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.618 |
| EHJ56604.1 | EHJ55857.1 | STRUR_1029 | STRUR_1031 | Hypothetical protein; Identified by glimmer; putative. | Cell surface heme-binding protein Shp; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.455 |
| EHJ56604.1 | EHJ56108.1 | STRUR_1029 | STRUR_1030 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein. | 0.558 |
| EHJ56604.1 | EHJ56801.1 | STRUR_1029 | STRUR_1028 | Hypothetical protein; Identified by glimmer; putative. | Putative membrane protein. | 0.701 |
| EHJ56604.1 | EHJ57038.1 | STRUR_1029 | STRUR_1032 | Hypothetical protein; Identified by glimmer; putative. | Putative high-affinity heme uptake system protein IsdE; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.455 |
| EHJ56801.1 | EHJ55857.1 | STRUR_1028 | STRUR_1031 | Putative membrane protein. | Cell surface heme-binding protein Shp; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.418 |
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