STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHJ57588.1Zeta toxin. (254 aa)    
Predicted Functional Partners:
EHJ55830.1
DNA-binding helix-turn-helix protein.
 
 
 
 0.992
EHJ56750.1
Hypothetical protein.
 
     0.890
EHJ56283.1
Hypothetical protein.
 
     0.886
EHJ56278.1
DNA-binding helix-turn-helix protein.
   
 
 0.650
EHJ56198.1
DNA-binding helix-turn-helix protein; Overlaps another CDS with the same product name.
   
 
 0.642
EHJ56994.1
DNA-binding helix-turn-helix protein; Overlaps another CDS with the same product name.
   
 
 0.642
EHJ57643.1
DNA-binding helix-turn-helix protein.
   
 
 0.642
EHJ56722.1
HTH-type transcriptional regulator AnsR family protein.
   
 
 0.642
EHJ56010.1
Hypothetical protein.
       0.613
EHJ56550.1
ABC-2 type transporter domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop.
  
     0.601
Your Current Organism:
Streptococcus urinalis
NCBI taxonomy Id: 764291
Other names: S. urinalis 2285-97, Streptococcus urinalis 2285-97, Streptococcus urinalis CCUG 41590, Streptococcus urinalis CDC 2285-97, Streptococcus urinalis CIP 106463, Streptococcus urinalis DSM 16830, Streptococcus urinalis LMG 19649, Streptococcus urinalis str. 2285-97, Streptococcus urinalis strain 2285-97
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