Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EHJ56090.1 | EHJ56100.1 | STRUR_0278 | STRUR_1375 | Hypothetical protein. | YbbR-like protein. | 0.405 |
| EHJ56090.1 | EHJ56478.1 | STRUR_0278 | STRUR_1369 | Hypothetical protein. | TIGR01906 family protein. | 0.540 |
| EHJ56090.1 | EHJ57402.1 | STRUR_0278 | STRUR_1371 | Hypothetical protein. | acyl-ACP thioesterase. | 0.543 |
| EHJ56090.1 | awd | STRUR_0278 | STRUR_1368 | Hypothetical protein. | Nucleoside pyrophosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.596 |
| EHJ56100.1 | EHJ56090.1 | STRUR_1375 | STRUR_0278 | YbbR-like protein. | Hypothetical protein. | 0.405 |
| EHJ56100.1 | EHJ56421.1 | STRUR_1375 | STRUR_1373 | YbbR-like protein. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.580 |
| EHJ56100.1 | EHJ56478.1 | STRUR_1375 | STRUR_1369 | YbbR-like protein. | TIGR01906 family protein. | 0.555 |
| EHJ56100.1 | EHJ56667.1 | STRUR_1375 | STRUR_1372 | YbbR-like protein. | Putative coproporphyrinogen dehydrogenase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.505 |
| EHJ56100.1 | EHJ57273.1 | STRUR_1375 | STRUR_1370 | YbbR-like protein. | HAD hydrolase, TIGR01457 family. | 0.481 |
| EHJ56100.1 | EHJ57402.1 | STRUR_1375 | STRUR_1371 | YbbR-like protein. | acyl-ACP thioesterase. | 0.486 |
| EHJ56100.1 | dacA | STRUR_1375 | STRUR_1376 | YbbR-like protein. | TIGR00159 family protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. | 0.948 |
| EHJ56100.1 | glmM | STRUR_1375 | STRUR_1374 | YbbR-like protein. | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.763 |
| EHJ56421.1 | EHJ56100.1 | STRUR_1373 | STRUR_1375 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | YbbR-like protein. | 0.580 |
| EHJ56421.1 | EHJ56478.1 | STRUR_1373 | STRUR_1369 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | TIGR01906 family protein. | 0.695 |
| EHJ56421.1 | EHJ56667.1 | STRUR_1373 | STRUR_1372 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Putative coproporphyrinogen dehydrogenase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.708 |
| EHJ56421.1 | EHJ57273.1 | STRUR_1373 | STRUR_1370 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | HAD hydrolase, TIGR01457 family. | 0.697 |
| EHJ56421.1 | EHJ57402.1 | STRUR_1373 | STRUR_1371 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | acyl-ACP thioesterase. | 0.699 |
| EHJ56421.1 | awd | STRUR_1373 | STRUR_1368 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Nucleoside pyrophosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.502 |
| EHJ56421.1 | dacA | STRUR_1373 | STRUR_1376 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | TIGR00159 family protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. | 0.525 |
| EHJ56421.1 | glmM | STRUR_1373 | STRUR_1374 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.626 |
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