Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EHJ55850.1 | EHJ55866.1 | STRUR_0507 | STRUR_0636 | DEAD/DEAH box helicase. | Competence domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.559 |
| EHJ55850.1 | EHJ56171.1 | STRUR_0507 | STRUR_2148 | DEAD/DEAH box helicase. | Type II/IV secretion system domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.816 |
| EHJ55850.1 | EHJ56304.1 | STRUR_0507 | STRUR_0635 | DEAD/DEAH box helicase. | Competence domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.559 |
| EHJ55850.1 | EHJ56715.1 | STRUR_0507 | STRUR_0570 | DEAD/DEAH box helicase. | Peptidase, A24A (type 4 prepilin peptidase 1) family protein. | 0.491 |
| EHJ55850.1 | EHJ56784.1 | STRUR_0507 | STRUR_0634 | DEAD/DEAH box helicase. | comEA protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.652 |
| EHJ55866.1 | EHJ55850.1 | STRUR_0636 | STRUR_0507 | Competence domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | DEAD/DEAH box helicase. | 0.559 |
| EHJ55866.1 | EHJ56171.1 | STRUR_0636 | STRUR_2148 | Competence domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Type II/IV secretion system domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.608 |
| EHJ55866.1 | EHJ56304.1 | STRUR_0636 | STRUR_0635 | Competence domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Competence domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.715 |
| EHJ55866.1 | EHJ56715.1 | STRUR_0636 | STRUR_0570 | Competence domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Peptidase, A24A (type 4 prepilin peptidase 1) family protein. | 0.620 |
| EHJ55866.1 | EHJ56784.1 | STRUR_0636 | STRUR_0634 | Competence domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | comEA protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.807 |
| EHJ56171.1 | EHJ55850.1 | STRUR_2148 | STRUR_0507 | Type II/IV secretion system domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | DEAD/DEAH box helicase. | 0.816 |
| EHJ56171.1 | EHJ55866.1 | STRUR_2148 | STRUR_0636 | Type II/IV secretion system domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Competence domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.608 |
| EHJ56171.1 | EHJ56266.1 | STRUR_2148 | STRUR_2149 | Type II/IV secretion system domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Hypothetical protein. | 0.630 |
| EHJ56171.1 | EHJ56304.1 | STRUR_2148 | STRUR_0635 | Type II/IV secretion system domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Competence domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.608 |
| EHJ56171.1 | EHJ56702.1 | STRUR_2148 | STRUR_0235 | Type II/IV secretion system domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Hypothetical protein; Belongs to the UPF0356 family. | 0.628 |
| EHJ56171.1 | EHJ56715.1 | STRUR_2148 | STRUR_0570 | Type II/IV secretion system domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Peptidase, A24A (type 4 prepilin peptidase 1) family protein. | 0.620 |
| EHJ56171.1 | EHJ56784.1 | STRUR_2148 | STRUR_0634 | Type II/IV secretion system domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | comEA protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.674 |
| EHJ56171.1 | EHJ57641.1 | STRUR_2148 | STRUR_0049 | Type II/IV secretion system domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Transglycosylase-like domain protein. | 0.762 |
| EHJ56171.1 | ezrA | STRUR_2148 | STRUR_0897 | Type II/IV secretion system domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family. | 0.613 |
| EHJ56171.1 | mecA | STRUR_2148 | STRUR_0369 | Type II/IV secretion system domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Negative regulator of genetic competence MecA; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. | 0.621 |
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