Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHJ51722.1HD domain protein. (170 aa)    
Predicted Functional Partners:
EHJ53244.1
Putative membrane protein; Belongs to the BI1 family.
  
    0.823
EHJ51717.1
RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
       0.789
EHJ52795.1
Acylphosphatase.
 
   
 0.736
yidC
60Kd inner membrane protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins; Belongs to the OXA1/ALB3/YidC family. Type 2 subfamily.
 
  
 0.688
EHJ52887.1
Putative diaminopimelate decarboxylase.
 
     0.684
rluB
Pseudouridine synthase B, ribosomal large subunit; Belongs to the pseudouridine synthase RsuA family.
       0.490
EHJ51835.1
Hypothetical protein.
  
     0.489
EHJ51791.1
KH domain protein; Belongs to the UPF0109 family.
  
    0.460
EHJ52696.1
Hypothetical protein.
 
 
   0.445
cinA
Competence/damage-inducible protein CinA; Belongs to the CinA family.
 
    0.430
Your Current Organism:
Streptococcus macacae
NCBI taxonomy Id: 764298
Other names: S. macacae NCTC 11558, Streptococcus macacae ATCC 35911, Streptococcus macacae CCUG 27653, Streptococcus macacae CIP 102912, Streptococcus macacae LMG 15097, Streptococcus macacae NCTC 11558, Streptococcus macacae str. NCTC 11558, Streptococcus macacae strain NCTC 11558
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