Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EHJ51621.1Transcriptional regulator, MarR family. (144 aa)    
Predicted Functional Partners:
EHJ52372.1
ABC transporter, ATP-binding protein.
 
   
 0.835
EHJ53070.1
ABC transporter transmembrane region.
 
     0.823
EHJ52025.1
PTS system, beta-glucoside-specific, IIABC component.
   
 
 0.661
EHJ52283.1
PTS system sucrose-specific IIBC component.
   
 
 0.661
treP
PTS system trehalose-specific IIBC component.
   
 
 0.661
EHJ51599.1
PTS system IIBC component.
   
 
 0.661
gpsA
Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
     
 0.476
EHJ53368.1
Flavin reductase.
   
    0.460
galU
UTP--glucose-1-phosphate uridylyltransferase.
       0.436
EHJ53332.1
Glu/Leu/Phe/Val dehydrogenase, dimerization domain protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
       0.414
Your Current Organism:
Streptococcus macacae
NCBI taxonomy Id: 764298
Other names: S. macacae NCTC 11558, Streptococcus macacae ATCC 35911, Streptococcus macacae CCUG 27653, Streptococcus macacae CIP 102912, Streptococcus macacae LMG 15097, Streptococcus macacae NCTC 11558, Streptococcus macacae str. NCTC 11558, Streptococcus macacae strain NCTC 11558
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