Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHJ52956.1PAS domain S-box protein. (448 aa)    
Predicted Functional Partners:
EHJ52101.1
Response regulator receiver domain protein.
 0.999
EHJ51710.1
Transcriptional regulatory protein, C-terminal domain protein.
 
 0.943
EHJ53092.1
Response regulator receiver domain protein.
  
 0.942
EHJ52337.1
Metallo-beta-lactamase domain protein.
  
  
 0.931
EHJ52702.1
Response regulator receiver domain protein.
 
 0.917
EHJ53292.1
Response regulator receiver domain protein.
 
 0.910
EHJ53285.1
Response regulator receiver domain protein.
 
 0.908
EHJ52525.1
Response regulator receiver domain protein.
 
 0.876
EHJ52640.1
Response regulator receiver domain protein.
 
 0.846
spaR
Subtilin biosynthesis regulatory protein SpaR.
 0.821
Your Current Organism:
Streptococcus macacae
NCBI taxonomy Id: 764298
Other names: S. macacae NCTC 11558, Streptococcus macacae ATCC 35911, Streptococcus macacae CCUG 27653, Streptococcus macacae CIP 102912, Streptococcus macacae LMG 15097, Streptococcus macacae NCTC 11558, Streptococcus macacae str. NCTC 11558, Streptococcus macacae strain NCTC 11558
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