Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EHJ52220.1 | EHJ53060.1 | STRMA_0984 | STRMA_0986 | Ribonuclease BN-like family protein. | DRTGG domain protein. | 0.720 |
| EHJ52220.1 | EHJ53256.1 | STRMA_0984 | STRMA_0983 | Ribonuclease BN-like family protein. | Hypothetical protein. | 0.512 |
| EHJ52220.1 | EHJ53362.1 | STRMA_0984 | STRMA_0987 | Ribonuclease BN-like family protein. | Acetyltransferase, GNAT family. | 0.739 |
| EHJ52220.1 | map | STRMA_0984 | STRMA_0985 | Ribonuclease BN-like family protein. | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.790 |
| EHJ52313.1 | EHJ52619.1 | STRMA_0780 | STRMA_0782 | AMP-binding enzyme; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts. | AMP-binding enzyme. | 0.999 |
| EHJ52313.1 | EHJ53362.1 | STRMA_0780 | STRMA_0987 | AMP-binding enzyme; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts. | Acetyltransferase, GNAT family. | 0.558 |
| EHJ52313.1 | argD | STRMA_0780 | STRMA_1059 | AMP-binding enzyme; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts. | Acetylornithine transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.468 |
| EHJ52313.1 | pheA | STRMA_0780 | STRMA_0438 | AMP-binding enzyme; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts. | Prephenate dehydratase. | 0.478 |
| EHJ52313.1 | rnc | STRMA_0780 | STRMA_0947 | AMP-binding enzyme; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts. | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 0.491 |
| EHJ52619.1 | EHJ52313.1 | STRMA_0782 | STRMA_0780 | AMP-binding enzyme. | AMP-binding enzyme; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts. | 0.999 |
| EHJ52619.1 | EHJ53362.1 | STRMA_0782 | STRMA_0987 | AMP-binding enzyme. | Acetyltransferase, GNAT family. | 0.572 |
| EHJ52619.1 | argD | STRMA_0782 | STRMA_1059 | AMP-binding enzyme. | Acetylornithine transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.679 |
| EHJ52619.1 | hisC | STRMA_0782 | STRMA_0383 | AMP-binding enzyme. | Histidinol-phosphate transaminase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.608 |
| EHJ52619.1 | map | STRMA_0782 | STRMA_0985 | AMP-binding enzyme. | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.474 |
| EHJ52619.1 | pheA | STRMA_0782 | STRMA_0438 | AMP-binding enzyme. | Prephenate dehydratase. | 0.665 |
| EHJ52619.1 | rnc | STRMA_0782 | STRMA_0947 | AMP-binding enzyme. | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 0.683 |
| EHJ53060.1 | EHJ52220.1 | STRMA_0986 | STRMA_0984 | DRTGG domain protein. | Ribonuclease BN-like family protein. | 0.720 |
| EHJ53060.1 | EHJ53256.1 | STRMA_0986 | STRMA_0983 | DRTGG domain protein. | Hypothetical protein. | 0.469 |
| EHJ53060.1 | EHJ53362.1 | STRMA_0986 | STRMA_0987 | DRTGG domain protein. | Acetyltransferase, GNAT family. | 0.800 |
| EHJ53060.1 | map | STRMA_0986 | STRMA_0985 | DRTGG domain protein. | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.744 |
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