STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHJ53353.1GBS Bsp-like repeat protein. (593 aa)    
Predicted Functional Partners:
EHJ53029.1
Serine-type D-Ala-D-Ala carboxypeptidase.
  
  
  0.688
EHJ52248.1
Penicillin-binding protein, transpeptidase domain protein.
     
  0.629
EHJ52934.1
Penicillin-binding protein, 1A family.
     
  0.629
EHJ51557.1
Penicillin-binding protein, transpeptidase domain protein.
     
  0.629
EHJ52862.1
Penicillin-binding protein, 1A family.
     
  0.629
EHJ52569.1
Serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
     
  0.629
EHJ52438.1
Transglycosylase.
     
  0.629
EHJ52078.1
Putative cross-wall-targeting lipoprotein signal.
    
  0.488
EHJ53331.1
Putative lipoprotein.
  
     0.435
comX
Competence-specific sigma factor ComX.
  
     0.425
Your Current Organism:
Streptococcus macacae
NCBI taxonomy Id: 764298
Other names: S. macacae NCTC 11558, Streptococcus macacae ATCC 35911, Streptococcus macacae CCUG 27653, Streptococcus macacae CIP 102912, Streptococcus macacae LMG 15097, Streptococcus macacae NCTC 11558, Streptococcus macacae str. NCTC 11558, Streptococcus macacae strain NCTC 11558
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