Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHJ51917.1ABC transporter, permease protein. (343 aa)    
Predicted Functional Partners:
EHJ52813.1
ABC transporter, permease protein.
 0.999
oppD
Oligopeptide ABC transporter, ATP-binding protein OppD; Belongs to the ABC transporter superfamily.
 0.999
EHJ52293.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 0.999
EHJ53195.1
ABC transporter, substrate-binding protein, family 5.
 
 
 0.975
EHJ51952.1
ATP-binding cassette cobalt transporter.
  
 0.858
EHJ52674.1
Hypothetical protein.
  
 0.851
EHJ52569.1
Serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
       0.538
EHJ53295.1
Branched-chain amino acid ABC transporter.
    
 0.507
Your Current Organism:
Streptococcus macacae
NCBI taxonomy Id: 764298
Other names: S. macacae NCTC 11558, Streptococcus macacae ATCC 35911, Streptococcus macacae CCUG 27653, Streptococcus macacae CIP 102912, Streptococcus macacae LMG 15097, Streptococcus macacae NCTC 11558, Streptococcus macacae str. NCTC 11558, Streptococcus macacae strain NCTC 11558
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