Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHJ53299.1Hypothetical protein; Identified by glimmer; putative. (53 aa)    
Predicted Functional Partners:
EHJ51584.1
Hypothetical protein.
       0.773
EHJ52873.1
Putative membrane protein.
       0.773
EHJ52021.1
Putative membrane protein.
       0.773
EHJ51628.1
Putative membrane protein.
       0.504
EHJ51810.1
Putative membrane protein.
       0.476
EHJ53068.1
Hypothetical protein.
       0.476
EHJ52230.1
Hypothetical protein.
       0.473
EHJ53390.1
Putative membrane protein.
       0.473
EHJ52228.1
Hypothetical protein; Identified by glimmer; putative.
       0.447
EHJ52849.1
Hypothetical protein; Identified by glimmer; putative.
       0.447
Your Current Organism:
Streptococcus macacae
NCBI taxonomy Id: 764298
Other names: S. macacae NCTC 11558, Streptococcus macacae ATCC 35911, Streptococcus macacae CCUG 27653, Streptococcus macacae CIP 102912, Streptococcus macacae LMG 15097, Streptococcus macacae NCTC 11558, Streptococcus macacae str. NCTC 11558, Streptococcus macacae strain NCTC 11558
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