Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EHI70615.1PTS system mannose/fructose/sorbose family IID component domain protein. (50 aa)    
Predicted Functional Partners:
EHI70661.1
PTS system sorbose-specific iic component.
 
 0.998
EHI70619.1
PTS system sorbose subfamily IIB component.
 
 0.995
EHI70852.1
PTS system sorbose subfamily IIB component.
  
 0.981
EHI70625.1
PTS system fructose IIA component.
  
 0.975
EHI69893.1
PTS system sorbose-specific iic component.
 
 0.943
EHI70583.1
PTS system mannose/fructose/sorbose family IID component; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts.
 
     0.933
EHI70919.1
PTS system sorbose-specific iic component.
  
 0.920
EHI69928.1
PTS system, Fru family, IIC component domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
  
 
 0.911
EHI69417.1
PTS system, Lactose/Cellobiose specific IIB subunit; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
  
 
 0.911
EHI70626.1
Glycosyl hydrolase, family 88.
 
     0.909
Your Current Organism:
Streptococcus ictaluri
NCBI taxonomy Id: 764299
Other names: S. ictaluri 707-05, Streptococcus ictaluri 707-05, Streptococcus ictaluri str. 707-05, Streptococcus ictaluri strain 707-05
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