Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
EHI70626.1Glycosyl hydrolase, family 88. (398 aa)    
Predicted Functional Partners:
EHI70661.1
PTS system sorbose-specific iic component.
 
     0.937
EHI70657.1
Polysaccharide lyase family 8, N-terminal alpha-helical domain protein.
 
  
 0.913
EHI70612.1
Heparinase II/III-like protein.
 
   
 0.912
EHI70615.1
PTS system mannose/fructose/sorbose family IID component domain protein.
 
     0.909
EHI70670.1
KR domain protein.
 
   
 0.906
EHI70619.1
PTS system sorbose subfamily IIB component.
 
     0.904
EHI70625.1
PTS system fructose IIA component.
 
    0.879
EHI70583.1
PTS system mannose/fructose/sorbose family IID component; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts.
 
     0.870
EHI70679.1
Ribose/galactose isomerase.
 
     0.745
EHI70620.1
Bacterial regulatory protein, LacI family.
 
  
 0.743
Your Current Organism:
Streptococcus ictaluri
NCBI taxonomy Id: 764299
Other names: S. ictaluri 707-05, Streptococcus ictaluri 707-05, Streptococcus ictaluri str. 707-05, Streptococcus ictaluri strain 707-05
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