STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHI70648.1DNA-binding helix-turn-helix protein. (130 aa)    
Predicted Functional Partners:
EHI70653.1
Hypothetical protein.
       0.773
EHI70647.1
Phage nucleotide-binding protein.
 
     0.557
EHI70628.1
Bifunctional DNA primase/polymerase, N-terminal domain protein.
 
     0.511
EHI70678.1
Type III restriction enzyme, res subunit.
       0.476
EHI70664.1
Hypothetical protein.
       0.468
EHI70671.1
Hypothetical protein.
       0.446
EHI70604.1
Nucleoside triphosphatase, D5 family.
       0.446
Your Current Organism:
Streptococcus ictaluri
NCBI taxonomy Id: 764299
Other names: S. ictaluri 707-05, Streptococcus ictaluri 707-05, Streptococcus ictaluri str. 707-05, Streptococcus ictaluri strain 707-05
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.