Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHI70647.1Phage nucleotide-binding protein. (226 aa)    
Predicted Functional Partners:
EHI70671.1
Hypothetical protein.
 
     0.949
EHI70678.1
Type III restriction enzyme, res subunit.
 
     0.906
EHI70686.1
VRR-NUC domain protein.
 
     0.844
EHI70604.1
Nucleoside triphosphatase, D5 family.
 
     0.810
EHI70664.1
Hypothetical protein.
       0.782
EHI70628.1
Bifunctional DNA primase/polymerase, N-terminal domain protein.
 
     0.777
EHI68916.1
Phage minor structural protein, N-terminal domain protein.
  
     0.643
EHI70254.1
Siphovirus.
 
     0.571
EHI70648.1
DNA-binding helix-turn-helix protein.
 
     0.557
EHI68970.1
Phage portal protein, SPP1 family.
  
     0.516
Your Current Organism:
Streptococcus ictaluri
NCBI taxonomy Id: 764299
Other names: S. ictaluri 707-05, Streptococcus ictaluri 707-05, Streptococcus ictaluri str. 707-05, Streptococcus ictaluri strain 707-05
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