Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHI70643.1DNA packaging protein, QLRG family. (100 aa)    
Predicted Functional Partners:
EHI70638.1
Putative phage head-tail adaptor.
       0.827
EHI70680.1
Hypothetical protein.
       0.827
EHI70659.1
Hypothetical protein.
       0.793
EHI70599.1
Putative phage major tail protein.
       0.777
EHI70662.1
Phage major capsid protein, HK97 family.
       0.523
EHI70685.1
Hypothetical protein.
       0.521
EHI70597.1
ATP-dependent Clp endopeptidase, proteolytic subunit ClpP-like protein; Belongs to the peptidase S14 family.
       0.463
EHI70690.1
Phage portal protein, HK97 family.
       0.460
Your Current Organism:
Streptococcus ictaluri
NCBI taxonomy Id: 764299
Other names: S. ictaluri 707-05, Streptococcus ictaluri 707-05, Streptococcus ictaluri str. 707-05, Streptococcus ictaluri strain 707-05
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