Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHI70638.1Putative phage head-tail adaptor. (115 aa)    
Predicted Functional Partners:
EHI70680.1
Hypothetical protein.
       0.833
EHI70643.1
DNA packaging protein, QLRG family.
       0.827
EHI70659.1
Hypothetical protein.
       0.793
EHI70599.1
Putative phage major tail protein.
       0.779
EHI70685.1
Hypothetical protein.
       0.522
EHI70662.1
Phage major capsid protein, HK97 family.
       0.511
EHI70597.1
ATP-dependent Clp endopeptidase, proteolytic subunit ClpP-like protein; Belongs to the peptidase S14 family.
       0.461
EHI70690.1
Phage portal protein, HK97 family.
       0.447
Your Current Organism:
Streptococcus ictaluri
NCBI taxonomy Id: 764299
Other names: S. ictaluri 707-05, Streptococcus ictaluri 707-05, Streptococcus ictaluri str. 707-05, Streptococcus ictaluri strain 707-05
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