Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHI70685.1Hypothetical protein. (108 aa)    
Predicted Functional Partners:
EHI70599.1
Putative phage major tail protein.
       0.555
EHI70651.1
Hypothetical protein.
       0.548
EHI70587.1
Phage tail tape measure protein, TP901 family.
       0.531
EHI70676.1
Putative phage tail component, N-terminal domain protein.
       0.531
EHI70631.1
Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
       0.531
EHI70638.1
Putative phage head-tail adaptor.
       0.522
EHI70680.1
Hypothetical protein.
       0.522
EHI70643.1
DNA packaging protein, QLRG family.
       0.521
EHI70659.1
Hypothetical protein.
       0.516
Your Current Organism:
Streptococcus ictaluri
NCBI taxonomy Id: 764299
Other names: S. ictaluri 707-05, Streptococcus ictaluri 707-05, Streptococcus ictaluri str. 707-05, Streptococcus ictaluri strain 707-05
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