Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHI70355.1Phosphoenolpyruvate-dependent sugar PTS family porter, EIIA 2; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. (109 aa)    
Predicted Functional Partners:
EHI70363.1
PTS system, Lactose/Cellobiose specific IIB subunit.
 
 
  0.968
EHI70441.1
Putative rhamnulose-1-phosphate aldolase.
 
 
 0.950
EHI69280.1
PTS system, Lactose/Cellobiose specific IIB subunit.
 
 
  0.915
EHI70334.1
Phosphoenolpyruvate-dependent sugar PTS family porter, EIIA 2.
 
     0.911
EHI69061.1
PTS system sugar-specific permease protein.
 
 
 0.910
EHI69326.1
PTS system sugar-specific permease protein.
 
 
 0.897
EHI69080.1
Phosphoenolpyruvate-dependent sugar PTS family porter, EIIA 2.
  
     0.748
ptsH
Phosphocarrier protein HPr.
  
 
 0.724
EHI69928.1
PTS system, Fru family, IIC component domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
  
 
 0.715
EHI69417.1
PTS system, Lactose/Cellobiose specific IIB subunit; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
  
 
 0.715
Your Current Organism:
Streptococcus ictaluri
NCBI taxonomy Id: 764299
Other names: S. ictaluri 707-05, Streptococcus ictaluri 707-05, Streptococcus ictaluri str. 707-05, Streptococcus ictaluri strain 707-05
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