Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EHI68964.1 | EHI69176.1 | STRIC_1985 | STRIC_1984 | Argininosuccinate synthase-like protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Arginosuccinate synthase domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.988 |
| EHI68964.1 | EHI70596.1 | STRIC_1985 | STRIC_0042 | Argininosuccinate synthase-like protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Aminotransferase, class I/II. | 0.587 |
| EHI68964.1 | EHI70996.1 | STRIC_1985 | STRIC_0784 | Argininosuccinate synthase-like protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Cyclic nucleotide-binding domain protein. | 0.461 |
| EHI68964.1 | asnA | STRIC_1985 | STRIC_0281 | Argininosuccinate synthase-like protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Aspartate--ammonia ligase. | 0.528 |
| EHI68964.1 | carB | STRIC_1985 | STRIC_1408 | Argininosuccinate synthase-like protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family. | 0.956 |
| EHI68964.1 | purA | STRIC_1985 | STRIC_1798 | Argininosuccinate synthase-like protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.621 |
| EHI68964.1 | pyrB | STRIC_1985 | STRIC_1410 | Argininosuccinate synthase-like protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.528 |
| EHI69176.1 | EHI68964.1 | STRIC_1984 | STRIC_1985 | Arginosuccinate synthase domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Argininosuccinate synthase-like protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.988 |
| EHI69176.1 | EHI70596.1 | STRIC_1984 | STRIC_0042 | Arginosuccinate synthase domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Aminotransferase, class I/II. | 0.587 |
| EHI69176.1 | EHI70996.1 | STRIC_1984 | STRIC_0784 | Arginosuccinate synthase domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Cyclic nucleotide-binding domain protein. | 0.461 |
| EHI69176.1 | asnA | STRIC_1984 | STRIC_0281 | Arginosuccinate synthase domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Aspartate--ammonia ligase. | 0.528 |
| EHI69176.1 | carB | STRIC_1984 | STRIC_1408 | Arginosuccinate synthase domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family. | 0.959 |
| EHI69176.1 | purA | STRIC_1984 | STRIC_1798 | Arginosuccinate synthase domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.621 |
| EHI69176.1 | pyrB | STRIC_1984 | STRIC_1410 | Arginosuccinate synthase domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.528 |
| EHI70395.1 | EHI70444.1 | STRIC_0280 | STRIC_0278 | RNA methyltransferase, RsmD family. | Lon protease S16 C-terminal proteolytic domain protein. | 0.798 |
| EHI70395.1 | asnA | STRIC_0280 | STRIC_0281 | RNA methyltransferase, RsmD family. | Aspartate--ammonia ligase. | 0.587 |
| EHI70395.1 | coaD | STRIC_0280 | STRIC_0279 | RNA methyltransferase, RsmD family. | Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.936 |
| EHI70444.1 | EHI70395.1 | STRIC_0278 | STRIC_0280 | Lon protease S16 C-terminal proteolytic domain protein. | RNA methyltransferase, RsmD family. | 0.798 |
| EHI70444.1 | asnA | STRIC_0278 | STRIC_0281 | Lon protease S16 C-terminal proteolytic domain protein. | Aspartate--ammonia ligase. | 0.587 |
| EHI70444.1 | coaD | STRIC_0278 | STRIC_0279 | Lon protease S16 C-terminal proteolytic domain protein. | Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.850 |
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