STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cas7CRISPR-associated protein Cas7/Cse4/CasC, subtype IE. (366 aa)    
Predicted Functional Partners:
cas6e
CRISPR-associated protein Cas6/Cse3/CasE, subtype IE.
 
 
 0.999
cas5e
CRISPR-associated protein Cas5/CasD, subtype IE.
 
 
 0.999
casB
CRISPR type IE-associated protein CasB/Cse2.
 
 
 0.999
EHI70366.1
CRISPR-associated protein Cse1; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop.
 
 
 0.996
cas3
CRISPR-associated helicase Cas3.
 
 
 0.990
EHI70376.1
Hypothetical protein; Identified by glimmer; putative.
  
 
 0.989
EHI70409.1
CRISPR-associated endonuclease Cas1-like protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
 
  
 0.966
EHI70349.1
Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
 
  
 0.966
cas2
CRISPR-associated endoribonuclease Cas2, subtype IE.
 
     0.959
EHI70347.1
Hypothetical protein; Identified by glimmer; putative.
  
 
 0.935
Your Current Organism:
Streptococcus ictaluri
NCBI taxonomy Id: 764299
Other names: S. ictaluri 707-05, Streptococcus ictaluri 707-05, Streptococcus ictaluri str. 707-05, Streptococcus ictaluri strain 707-05
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.