Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHI70438.1ABC-2 type transporter. (372 aa)    
Predicted Functional Partners:
EHI70408.1
ABC-2 type transporter.
 
 
 0.985
sagG
ABC transporter, ATP-binding protein SagG.
 
 
 0.980
sagB
Streptolysin associated protein SagB.
 
  
 0.979
sagD
Streptolysin-associated protein SagD.
 
  
 0.940
EHI70341.1
CAAX amino terminal protease family protein.
  
  
 0.899
EHI70360.1
Hypothetical protein.
  
  
 0.888
EHI69677.1
Nitroreductase family protein.
 
  
 0.678
EHI70086.1
Nitroreductase family protein.
 
  
 0.672
EHI70902.1
Putative bacitracin ABC transporter, ATP-binding protein BcrA.
  
 
 0.653
EHI70808.1
ABC transporter, ATP-binding protein.
  
 
 0.653
Your Current Organism:
Streptococcus ictaluri
NCBI taxonomy Id: 764299
Other names: S. ictaluri 707-05, Streptococcus ictaluri 707-05, Streptococcus ictaluri str. 707-05, Streptococcus ictaluri strain 707-05
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